Table 1

Enrichment analyses of the genes/mRNAs predicted to be targets of human and mouse miR-137 using the DIANA tool*

Functional gene categoryp valueNo. of genes
Human miR-137 putative targets
Biological functions
 Cancer< 0.001531
 Organismal death< 0.001238
 Size of body< 0.00198
 Movement disorders< 0.001117
 Locomotion< 0.00145
 Neuritogenesis< 0.00158
 Learning< 0.00151
 Epilepsy< 0.00140
 Action potential of neurons< 0.00122
 Chorea< 0.00172
Canonical pathways
 PAK signalling0.00216
 Protein kinase A signalling0.00339
 Ephrin receptor signalling0.00622
 Paxillin signalling0.00815
 Agrin Interactions at neuromuscular junction0.00812
 Cardiac β-adrenergic signalling0.00918
 D-myo-inositol-5-phosphate metabolism0.00918
 SAPK/JNK signalling0.00914
 Glucocorticoid receptor signalling0.00927
 Sertoli cell-sertoli cell junction signalling0.00921
Mouse miR-137 putative targets
Biological functions
 Organismal death< 0.001200
 Cancer< 0.001410
 Size of body< 0.00184
 Development of muscle< 0.00143
 Neurotransmission< 0.00146
 Development of digestive system< 0.00139
 Locomotion< 0.00137
 Action potential of neurons< 0.00119
 Morphogenesis of embryonic limb< 0.00115
 Morphogenesis of forelimb< 0.0019
Canonical pathways
 Paxillin signalling< 0.00117
 PAK signalling< 0.00116
 Agrin Interactions at neuromuscular junction< 0.00112
 Ephrin receptor signalling0.00318
 Axonal guidance signalling0.00334
 Glucocorticoid receptor signalling0.00424
 Ephrin A signalling0.0049
 Rac signalling0.00613
 Protein kinase A signalling0.00630
 Sertoli cell-sertoli cell junction signalling0.00618
  • JNK = jun amino-terminal kinases; PAK = p21-activated kinases; SAPK = stress-activated protein kinases.

  • * The top 10 enriched gene categories for biological functions and canonical pathways (from the Ingenuity tool, www.ingenuity.com) are shown (see Methods). All categories that are directly related to the (normal) development and/or function of the nervous system are underlined.

  • Significance was determined from a single test p value calculated using the right-tailed Fisher exact test and taking into consideration both the total number of molecules from the analyzed data set and the total number of molecules linked to the same gene category according to the Ingenuity Knowledge Base. Adjusted significance was determined from multiple test–corrected p values using the Benjamini–Hochberg correction (only categories reaching a corrected statistical significance of p < 0.05 are shown).