Table 2

Summary of mouse genes in the M5 module with high module membership and gene significance (correlated with Rasgrf2 expression levels) and their corresponding genetic association with binge drinking in humans.

Mouse gene expressionHuman genetic association
Wild-type v. Rasgrf2−/−Rasgrf2 expressionBinge drinking
Mouse geneMMFCp valuerp valueHuman genenSNP*p value
Ehd40.940.67< 0.0010.71< 0.001EHD430rs1648821< 0.001
Klc10.770.78< 0.0010.640.004KLC110rs8615500.009
Slc5a50.741.23< 0.0010.660.003SLC5A56rs75080250.011
Capn30.660.170.0060.670.002CAPN39rs49246750.017
Dcp1b0.830.58< 0.0010.610.008DCP1B16rs9726570.022
Snapc30.820.38< 0.0010.620.006SNAPC310rs64749150.023
Emp20.790.44< 0.0010.590.009EMP230rs64980700.024
Lypd6b0.790.39< 0.0010.600.008LYPD6B49rs104903830.026
Ccl170.630.350.0040.600.008CCL178rs47848050.026
Snapc10.810.42< 0.0010.630.005SNAPC18rs71436260.036
Adamts90.980.85< 0.0010.610.007ADAMTS967rs67932770.037
Gpr1760.730.32< 0.0010.630.005GPR17626rs176468470.045
Map4k50.830.23< 0.0010.640.004MAP4K520rs128818690.049
Neo10.930.61< 0.0010.630.005NEO130rs41325350.06
Pgpep10.850.45< 0.0010.610.008PGPEP111rs19784230.09
Pbx40.670.240.0030.650.003PBX47rs126101850.11
Rnd30.920.89< 0.0010.630.005RND312rs15284290.12
Zfp6090.730.140.0050.610.008ZNF60910rs5478180.12
Polr3k0.810.28< 0.0010.76< 0.001POLR3K5rs2166000.13
A330021E22Rik0.971.28< 0.0010.600.008C7orf6315rs115634350.17
Tmco50.750.180.0020.690.002TMCO5A5rs16045280.19
2410076I21Rik0.790.26< 0.0010.620.006C15orf6013rs71760740.24
Lrrc570.992.44< 0.0010.610.007LRRC571rs108514100.50
Tubgcp40.950.62< 0.0010.700.001TUBGCP43rs24127800.53
Itgb3bp0.880.61< 0.0010.74< 0.001ITGB3BP9rs37908670.54
Dguok0.830.38< 0.0010.620.006DGUOK9rs134118810.56
Xkr80.720.35< 0.0010.630.005XKR86rs49083820.74
Arl5a0.971.70< 0.0010.640.004ARL5A2rs101825330.78
  • FC = fold change on log2 scale between wild-type and Rasgrf2−/− mice; MM = module membership; SNP = single-nucleotide polymorphism.

  • * SNP with the lowest p value (best SNP) for the gene.