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Immunohistochemical staining of post-mortem adult human brain sections

Abstract

One of the challenges for modern neuroscience is to understand the basis of coordinated neuronal function and networking in the human brain. Some of these questions can be addressed using low- and high-resolution imaging techniques on post-mortem human brain tissue. We have established a versatile protocol for fixation of post-mortem adult human brain tissue, storage of the tissue in a human brain bank, and immunohistochemical analysis in order to understand human brain functions in normal controls and in neuropathological conditions. The brains are fixed by perfusion through the internal carotid and basilar arteries to enhance the penetration of fixative throughout the brain, then blocked, postfixed, cryoprotected, snap-frozen and stored at –80 °C. Sections are processed for immunohistochemical single- or double-label staining and conventional-, electron- or confocal laser scanning-microscopy analysis. The results gained using this tissue and protocol are vital for determining the localization of neurochemicals throughout the human brain and to document the changes that occur in neurological diseases.

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Figure 1: Examples of images taken of sections from various regions of the human brain that have been immunohistochemically labeled with a variety of neurotransmitter receptors and neurochemical labels.
Figure 2: Confocal laser-scanning microscopy images of the human subventricular zone (SVZ) showing progenitor cells that can be detected using specific antibodies.
Figure 3: Illustrations showing the procedure for blocking of the brain.
Figure 4: Blocking the basal ganglia, thalamus and hippocampus.
Figure 5

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References

  1. Waldvogel, H.J. et al. Distribution of gephyrin in the human brain: an immunohistochemical analysis. Neuroscience 116, 145–156 (2003).

    Article  CAS  Google Scholar 

  2. Waldvogel, H.J., Billinton, A., White, J.H., Emson, P.C. & Faull, R.L. Comparative cellular distribution of GABAA and GABAB receptors in the human basal ganglia: immunohistochemical colocalization of the alpha 1 subunit of the GABAA receptor, and the GABABR1 and GABABR2 receptor subunits. J. Comp. Neurol. 470, 339–356 (2004).

    Article  CAS  Google Scholar 

  3. Waldvogel, H.J., Kubota, Y., Fritschy, J.M., Mohler, H. & Faull, R.L.M. Regional and cellular localization of GABA(A) receptor subunits in the human basal ganglia: An autoradiographic and immunohistochemical study. J. Comp. Neurol. 415, 313–340 (1999).

    Article  CAS  Google Scholar 

  4. Baer, K. et al. Association of gephyrin and glycine receptors in the human brainstem and spinal cord: an immunohistochemical analysis. Neuroscience 122, 773–784 (2003).

    Article  CAS  Google Scholar 

  5. Waldvogel, H.J. & Faull, R.L.M. Compartmentalization of parvalbumin immunoreactivity in the human striatum. Brain Res. 610, 311–316 (1993).

    Article  CAS  Google Scholar 

  6. Munkle, M.C., Waldvogel, H.J. & Faull, R.L. The distribution of calbindin, calretinin and parvalbumin immunoreactivity in the human thalamus. J. Chem Neuroanat. 19, 155–173 (2000).

    Article  CAS  Google Scholar 

  7. Pearson, A.G., Curtis, M.A., Waldvogel, H.J., Faull, R.L. & Dragunow, M. Activating transcription factor 2 expression in the adult human brain: association with both neurodegeneration and neurogenesis. Neuroscience 133, 437–451 (2005).

    Article  CAS  Google Scholar 

  8. Curtis, M.A., Waldvogel, H.J., Synek, B. & Faull, R.L. A histochemical and immunohistochemical analysis of the subependymal layer in the normal and Huntington's disease brain. J. Chem. Neuroanat. 30, 55–66 (2005).

    Article  CAS  Google Scholar 

  9. Vonsattel, J.P. et al. Neuropathological classification of Huntington's disease. J. Neuropathol. Exp. Neurol. 44, 559–577 (1985).

    Article  CAS  Google Scholar 

  10. Vonsattel, J.P.G. & Difiglia, M. Huntington-Disease. J. Neuropathol. Exp. Neurol. 57, 369–384 (1998).

    Article  CAS  Google Scholar 

  11. Fritschy, J.M., Weinmann, O., Wenzel, A. & Benke, D. Synapse-specific localization of NMDA and GABA(a) receptor subunits revealed by antigen-retrieval immunohistochemistry. J. Comp. Neurol. 390, 194–210 (1998).

    Article  CAS  Google Scholar 

  12. Curtis, M.A. et al. Increased cell proliferation and neurogenesis in the adult human Huntington's disease brain. Proc. Natl. Acad. Sci. USA 100, 9023–9027 (2003).

    Article  CAS  Google Scholar 

  13. Ewert, M., Shivers, B.D., Luddens, H., Mohler, H. & Seeburg, P.H. Subunit selectivity and epitope characterization of mAbs directed against the GABAA/benzodiazepine receptor. J. Cell Biol. 110, 2043–2048 (1990).

    Article  CAS  Google Scholar 

  14. Fritschy, J.M. & Mohler, H. Gaba(a)-receptor heterogeneity in the adult rat brain - differential regional and cellular distribution of seven major subunits. J. Comp. Neurol. 359, 154–194 (1995).

    Article  CAS  Google Scholar 

  15. Adams, J.C. Heavy metal intensification of DAB-based HRP reaction product. J. Histochem. Cytochem. 29, 775 (1981).

    Article  CAS  Google Scholar 

  16. Oorschot, D.E. Total number of neurons in the neostriatal, pallidal, subthalamic, and substantia nigral nuclei of the rat basal ganglia: a stereological study using the cavalieri and optical disector methods. J. Comp. Neurol. 366, 580–599 (1996).

    Article  CAS  Google Scholar 

  17. Gundersen, H.J. et al. The new stereological tools: disector, fractionator, nucleator and point sampled intercepts and their use in pathological research and diagnosis. Apmis 96, 857–881 (1988).

    Article  CAS  Google Scholar 

  18. Thompson-Vest, N.M., Waldvogel, H.J., Rees, M.I. & Faull, R.L.M. GABA(A) receptor subunit and gephyrin protein changes differ in the globus pallidus in Huntington's diseased brain. Brain Res. 994, 265–270 (2003).

    Article  CAS  Google Scholar 

  19. Billinton, A. et al. GABA(B) receptor heterodimer-component localization in human brain. Molec. Brain Res. 77, 111–124 (2000).

    Article  CAS  Google Scholar 

  20. Pfeiffer, F., Simler, R., Grenningloh, G. & Betz, H. Monoclonal antibodies and peptide mapping reveal structural similarities between the subunits of the glycine receptor of rat spinal cord. Proc. Natl. Acad. Sci. USA 81, 7224–7227 (1984).

    Article  CAS  Google Scholar 

  21. van Roon-Mom, W.M., Hogg, V.M., Tippett, L.J. & Faull, R.L. Aggregate distribution in frontal and motor cortex in Huntington's disease brain. Neuroreport 17, 667–670 (2006).

    Article  Google Scholar 

  22. Schroder, S., Hoch, W., Becker, C.M., Grenningloh, G. & Betz, H. Mapping of antigenic epitopes on the alpha 1 subunit of the inhibitory glycine receptor. Biochemistry 30, 42–47 (1991).

    Article  CAS  Google Scholar 

  23. Curtis, M.A. et al. The distribution of progenitor cells in the subependymal layer of the lateral ventricle in the normal and Huntington's disease human brain. Neuroscience 132, 777–788 (2005).

    Article  CAS  Google Scholar 

  24. Hermann, A., Kneussel, M. & Betz, H. Identification of multiple gephyrin variants in different organs of the adult rat. Biochem. Biophys. Res. Commun. 282, 67–70 (2001).

    Article  CAS  Google Scholar 

  25. Curtis, M.A., Faull, R.L. & Glass, M. A novel population of progenitor cells expressing cannabinoid receptors in the subependymal layer of the adult normal and Huntington's disease human brain. J. Chem. Neuroanat. 31, 210–215 (2006).

    Article  CAS  Google Scholar 

  26. Baer, K., Eriksson, P.S., Faull, R.L.M., Rees, M.I. & Curtis, M.A. Sox-2 is expressed by glial and progenitor cells and Pax-6 is expressed by neuroblasts in the human subventricular zone. Exp. Neurol.,in the press.

  27. Shi, S.R., Cote, R.J. & Taylor, C.R. Antigen retrieval immunohistochemistry: past, present, and future. J. Histochem. Cytochem. 45, 327–343 (1997).

    Article  CAS  Google Scholar 

  28. Boon, M.E. & Kok, L.P. Microwaves for immunohistochemistry. Micron 25, 151–170 (1994).

    Article  CAS  Google Scholar 

  29. Loup, F. et al. A highly sensitive immunofluorescence procedure for analyzing the subcellular distribution of Gaba(a) receptor subunits in the human brain. J. Histochem. Cytochem. 46, 1129–1139 (1998).

    Article  CAS  Google Scholar 

  30. Barden, H. Interference filter microfluorometry of neuromelanin and lipofuscin in human brain. J. Neuropathol. Exp. Neurol. 39, 598–605 (1980).

    Article  CAS  Google Scholar 

  31. Schnell, S.A., Staines, W.A. & Wessendorf, M.W. Reduction of lipofuscin-like autofluorescence in fluorescently labeled tissue. J. Histochem. Cytochem. 47, 719–730 (1999).

    Article  CAS  Google Scholar 

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Acknowledgements

We would like to thank J. Bullock for expert technical assistance, the Biomedical Imaging Research Unit of the University of Auckland for their expert assistance and all of the families for donating the tissue for our studies. This study was supported by the Health Research Council of New Zealand, The Neurological Foundation of New Zealand and the Auckland Medical Research Fund. M.C is supported by a Neurological Foundation of New Zealand Wrightson Fellowship.

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Correspondence to Henry J Waldvogel.

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Waldvogel, H., Curtis, M., Baer, K. et al. Immunohistochemical staining of post-mortem adult human brain sections. Nat Protoc 1, 2719–2732 (2006). https://doi.org/10.1038/nprot.2006.354

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