Somatic mutations affect key pathways in lung adenocarcinoma
Determining the genetic basis of cancer requires comprehensive analyses of large collections
of histopathologically well-classified primary tumours. Here we report the results of a …
of histopathologically well-classified primary tumours. Here we report the results of a …
Genome remodelling in a basal-like breast cancer metastasis and xenograft
Massively parallel DNA sequencing technologies provide an unprecedented ability to
screen entire genomes for genetic changes associated with tumour progression. Here we …
screen entire genomes for genetic changes associated with tumour progression. Here we …
[PDF][PDF] Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in PDGFRA, IDH1, EGFR, and NF1
The Cancer Genome Atlas Network recently cataloged recurrent genomic abnormalities in
glioblastoma multiforme (GBM). We describe a robust gene expression-based molecular …
glioblastoma multiforme (GBM). We describe a robust gene expression-based molecular …
[HTML][HTML] Clonal evolution in relapsed acute myeloid leukaemia revealed by whole-genome sequencing
Most patients with acute myeloid leukaemia (AML) die from progressive disease after relapse,
which is associated with clonal evolution at the cytogenetic level 1 , 2 . To determine the …
which is associated with clonal evolution at the cytogenetic level 1 , 2 . To determine the …
[HTML][HTML] DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome
Acute myeloid leukaemia is a highly malignant haematopoietic tumour that affects about
13,000 adults in the United States each year. The treatment of this disease has changed little in …
13,000 adults in the United States each year. The treatment of this disease has changed little in …
[HTML][HTML] The genetic basis of early T-cell precursor acute lymphoblastic leukaemia
Early T-cell precursor acute lymphoblastic leukaemia (ETP ALL) is an aggressive malignancy
of unknown genetic basis. We performed whole-genome sequencing of 12 ETP ALL cases …
of unknown genetic basis. We performed whole-genome sequencing of 12 ETP ALL cases …
[PDF][PDF] Oncogenic signaling pathways in the cancer genome atlas
Genetic alterations in signaling pathways that control cell-cycle progression, apoptosis, and
cell growth are common hallmarks of cancer, but the extent, mechanisms, and co-…
cell growth are common hallmarks of cancer, but the extent, mechanisms, and co-…
VarScan 2: somatic mutation and copy number alteration discovery in cancer by exome sequencing
Cancer is a disease driven by genetic variation and mutation. Exome sequencing can be
utilized for discovering these variants and mutations across hundreds of tumors. Here we …
utilized for discovering these variants and mutations across hundreds of tumors. Here we …
[HTML][HTML] Mutational landscape and significance across 12 major cancer types
The Cancer Genome Atlas (TCGA) has used the latest sequencing and analysis methods to
identify somatic variants across thousands of tumours. Here we present data and analytical …
identify somatic variants across thousands of tumours. Here we present data and analytical …
[HTML][HTML] Targetable kinase-activating lesions in Ph-like acute lymphoblastic leukemia
…, YL Yang, D Pei, K McCastlain, L Ding… - New England journal …, 2014 - Mass Medical Soc
Background Philadelphia chromosome–like acute lymphoblastic leukemia (Ph-like ALL) is
characterized by a gene-expression profile similar to that of BCR–ABL1–positive ALL, …
characterized by a gene-expression profile similar to that of BCR–ABL1–positive ALL, …