User profiles for Patrick Aloy

Patrick Aloy

ICREA Research Professor at the Institute for Research in Biomedicine
Verified email at irbbarcelona.org
Cited by 17989

Proteome survey reveals modularity of the yeast cell machinery

AC Gavin, P Aloy, P Grandi, R Krause, M Boesche… - Nature, 2006 - nature.com
Protein complexes are key molecular entities that integrate multiple gene products to
perform cellular functions. Here we report the first genome-wide screen for complexes in an …

[HTML][HTML] A proteome-scale map of the human interactome network

…, Y Xia, AL Barabási, LM Iakoucheva, P Aloy… - Cell, 2014 - cell.com
Just as reference genome sequences revolutionized human genetics, reference maps of
interactome networks will be critical to fully understand genotype-phenotype relationships. Here…

A reference map of the human binary protein interactome

…, Y Xia, X Yang, E Yeger-Lotem, Q Zhong, P Aloy… - Nature, 2020 - nature.com
Global insights into cellular organization and genome function require comprehensive
understanding of the interactome networks that mediate genotype–phenotype relationships 1 , 2 . …

[PDF][PDF] Widespread expansion of protein interaction capabilities by alternative splicing

…, B Charloteaux, AA Chen, MA Calderwood, P Aloy… - Cell, 2016 - cell.com
While alternative splicing is known to diversify the functional characteristics of some genes,
the extent to which protein isoforms globally contribute to functional complexity on a …

Interactome3D: adding structural details to protein networks

R Mosca, A Céol, P Aloy - Nature methods, 2013 - nature.com
Network-centered approaches are increasingly used to understand the fundamentals of biology.
However, the molecular details contained in the interaction networks, often necessary to …

Relation between amino acid composition and cellular location of proteins

J Cedano, P Aloy, JA Perez-Pons, E Querol - Journal of molecular biology, 1997 - Elsevier
A correlation analysis of the amino acid composition and the cellular location of a protein is
presented. The statistical analysis discriminates among the following five protein classes: …

Structure-based assembly of protein complexes in yeast

P Aloy, B Bottcher, H Ceulemans, C Leutwein… - Science, 2004 - science.org
Images of entire cells are preceding atomic structures of the separate molecular machines
that they contain. The resulting gap in knowledge can be partly bridged by protein-protein …

Interrogating protein interaction networks through structural biology

P Aloy, RB Russell - … of the National Academy of Sciences, 2002 - National Acad Sciences
Protein–protein interactions are central to most biological processes. Although much recent
effort has been put into methods to identify interacting partners, there has been a limited …

Structural systems biology: modelling protein interactions

P Aloy, RB Russell - Nature Reviews Molecular Cell Biology, 2006 - nature.com
Much of systems biology aims to predict the behaviour of biological systems on the basis of
the set of molecules involved. Understanding the interactions between these molecules is …

Unveiling the role of network and systems biology in drug discovery

A Pujol, R Mosca, J Farrés, P Aloy - Trends in pharmacological sciences, 2010 - cell.com
Network and systems biology offer a novel way of approaching drug discovery by developing
models that consider the global physiological environment of protein targets, and the …